SYNOPSIS
view_roi_results -analysis lohfso -roianalysis lohfso -roi ffa -sf sessid -df sessdir [optional arguments]
Type ``view_roi_results -man'' for complete documentation
DESCRIPTION
Running compute_roi to compute an ROI average creates a number of data sets, viewing of which can be somewhat tedious. This is where view_roi_results comes in. This script, which starts a Matlab GUI, allows one to easily view the results of an ROI computation. Thus, for blocked runs, you will be able to view the raw time course over the ROI, the estimated deviation from baseline (and errors) and the estimated percent signal change (and errors); for event-related, you will be able to view the estimated time-course (and errors) in both raw scanner units and percent signal change.
Within the GUI, click on the help menu to get more information. If, at some time when running view_roi_results, you want to load another data structure, you can do this from the ``File...Open...'' menu option.
ARGUMENTS
REQUIRED ARGUMENTS
- -analysis analysisName
- Name of a fsfast analysis
- -roianalysis roiAnalysisName
- Name of the analysis from which you computed the ROI. Do not use in conjunction with -maskdir.
- -roi roiName
- Name of the ROI whose results you want to view.
- -sf sessidfile
- Name of the session ID file. Note that only one session ID in the file will be used (the last one)
- -df sessdirfile
- Name of the session directory file.
OPTIONAL ARGUMENTS
- -maskdir masks
- Name of the directory where the ROI is saved. Only use if you saved data to a non-standard location when running make_roi. The default is to use the -roianalysis option to get the directory roiAnalysis_ROI. Do not use in conjunction with -roianalysis.
- -help
- Provides complete argument information.
- -man
- Provides verbose usage information.
- -debug
- Provides complete debugging information.
EXAMPLE
view_roi_results -analysis lohfso -roianalysis lohfso -roi ffa -sf sessid -df sessdir.
BUGS
None known; send an e-mail to <froi-bugs@sourceforge.net> for bug reports.
AUTHOR
Nicholas Knouf, <nknouf@mit.edu>, <nknouf@mimeme.net>
COPYRIGHT & LICENSE
Copyright (c) 2003, Nicholas Knouf, MIT.
This program is free software and is governed by the terms of the Artistic License.
REVISION
$Id: view_roi_results,v 1.4 2003/10/06 16:03:47 nknouf Exp $
SEE ALSO
make_roi, edit_roi, compute_roi